Yilin Fang
Pacific Northwest National Laboratory
PO Box 999
Richland, WA 99352
(509) 372-4051
Send Email
PNNL Publications
2024
- He X., M.L. Rockhold, Y. Fang, A.R. Lawter, V. Freedman, R.D. Mackley, and N. Qafoku. 2024. "Experimental and Numerical Study of Radioiodine Sorption and Transport in Hanford Sediments." ACS Earth and Space Chemistry 8, no. 2:323-334. PNNL-SA-191180. doi:10.1021/acsearthspacechem.3c00291
- Shi M., L. Li, X. Lin, Y. Fang, and Z. Hou. 2024. An ML-based terrestrial data fusion and augmentation framework to enable advanced understanding of the terrestrial carbon and water interactions. PNNL-36677. Richland, WA: Pacific Northwest National Laboratory. An ML-based terrestrial data fusion and augmentation framework to enable advanced understanding of the terrestrial carbon and water interactions
2023
- Ding J., N.G. McDowell, Y. Fang, N.D. Ward, M. Kirwan, P.J. Regier, and J.P. Megonigal, et al. 2023. "Modeling the mechanisms of conifer mortality under seawater exposure." New Phytologist 239, no. 5:1679-1691. PNNL-SA-186478. doi:10.1111/nph.19076
- Fang Y., and L. Leung. 2023. "Northern hemisphere snow drought in Earth system model simulations and ERA5-Land data in 1980-2014." Journal of Geophysical Research: Atmospheres 128, no. 23:Art. No. e2023JD039308. PNNL-SA-185753. doi:10.1029/2023JD039308
- Garcia-Arredondo M., Y. Fang, M. Jones, S.B. Yabusaki, Z. Cardon, and M. Keiluweit. 2023. "Resolving dynamic mineral-organic interactions in the rhizosphere by combining in-situ microsensors with plant-soil reactive transport modeling." Soil Biology and Biochemistry 184. PNNL-SA-187210. doi:10.1016/j.soilbio.2023.109097
- Li L., Y. Fang, Z. Zheng, M. Shi, M. Longo, C.D. Koven, and J.A. Holm, et al. 2023. "A machine learning approach targeting parameter estimation for plant functional type coexistence modeling using ELM-FATES (V2.0)." Geoscientific Model Development 16, no. 14:4017-4040. PNNL-SA-180863. doi:10.5194/gmd-16-4017-2023
- McDowell N.G., K.J. Anderson-Teixeira, J.A. Biederman, D.D. Breshears, Y. Fang, L. Fernandez De Una, and E.B. Graham, et al. 2023. "Ecohydrological Decoupling under Changing Disturbances and Climate." One Earth 6, no. 3:251-266. PNNL-SA-189590. doi:10.1016/j.oneear.2023.02.007
- Saslow S.A., T.G. Levitskaia, E. Cordova, N.M. Avalos, D. Boglaienko, Y. Fang, and X. Song, et al. 2023. "Part I: Predicting Performance of Purolite A532E Resins for Remediation of Comingled Contaminants in Groundwater." Journal of Environmental Chemical Engineering 11, no. 3:Art. No. 109618. PNNL-SA-178092. doi:10.1016/j.jece.2023.109618
- Saslow S.A., T.G. Levitskaia, E. Cordova, N.M. Avalos, D. Boglaienko, Y. Fang, and X. Song, et al. 2023. "Part II: Predicting Performance of DOWEX 21K Resin for Remediation of Comingled Contaminants in Groundwater." Journal of Environmental Chemical Engineering 11, no. 3:Art. No. 109620. PNNL-SA-178093. doi:10.1016/j.jece.2023.109620
2022
- Bao J., Y. Chen, Y. Fang, X. Song, W.A. Perkins, Z. Duan, and P. Shuai, et al. 2022. "Modeling framework for evaluating the impacts of hydrodynamic pressure on hydrologic exchange fluxes and residence time for a large-scale river section over a long-term period." Environmental Modelling & Software 148. PNNL-SA-152147. doi:10.1016/j.envsoft.2021.105277
- Chen Y., J. Bao, Y. Fang, W.A. Perkins, H. Ren, X. Song, and Z. Duan, et al. 2022. "Modeling of streamflow in a 30 km long reach spanning 5 years using OpenFOAM 5.x." Geoscientific Model Development 15, no. 7:2917-2947. PNNL-SA-151719. doi:10.5194/gmd-15-2917-2022
- Fang Y., and L. Leung. 2022. "Relative controls of vapor pressure deficit and soil water stress on canopy conductance in global simulations by an Earth system model." Earth's Future 10, no. 9:Art. No. e2022EF002810. PNNL-SA-168923. doi:10.1029/2022EF002810
- Fang Y., L. Leung, C.D. Koven, G. Bisht, M. Detto, Y. Cheng, and N.G. McDowell, et al. 2022. "Modeling the topographic influence on aboveground biomass using a coupled model of hillslope hydrology and ecosystem dynamics." Geoscientific Model Development 15, no. 20:7879-7901. PNNL-SA-168572. doi:10.5194/gmd-15-7879-2022
- Fang Y., L. Leung, R. Knox, C.D. Koven, and B. Bond-Lamberty. 2022. "Impact of the numerical solution approach of a plant hydrodynamic model (v0.1) on vegetation dynamics." Geoscientific Model Development 15, no. 16:6385-6398. PNNL-SA-172156. doi:10.5194/gmd-15-6385-2022
- Lambert M., H. Tang, K.S. Aas, F. Stordal, R.A. Fisher, Y. Fang, and J. Ding, et al. 2022. "Inclusion of a cold hardening scheme to represent frost tolerance is essential to model realistic plant hydraulics in the Arctic-Boreal Zone in CLM5.0-FATES-Hydro." Geoscientific Model Development 15, no. 23:8809-8829. PNNL-SA-179858. doi:10.5194/gmd-15-8809-2022
- Son K., Y. Fang, J.D. Gomez Velez, and X. Chen. 2022. "Spatial microbial respiration variations in the hyporheic zones within the Columbia River Basin." Journal of Geophysical Research: Biogeosciences 127, no. 11:Art. No. e2021JG006654. PNNL-SA-178479. doi:10.1029/2021JG006654
- Son K., Y. Fang, J.D. Gomez Velez, K. Byun, and X. Chen. 2022. "Combined effects of stream hydrology and land use on basin-scale hyporheic zone denitrification in the Columbia River Basin." Water Resources Research 58, no. 12:Art. No. e2021WR031131. PNNL-SA-165887. doi:10.1029/2021WR031131
2021
- Chen X., R.M. Lee, D. Dwivedi, K. Son, Y. Fang, X. Zhang, and E.B. Graham, et al. "Integrating Field Observations and Reactive Transport Modeling to Predict Watershed Water Quality under Environmental Perturbations."
- Chen X., R.M. Lee, D. Dwivedi, K. Son, Y. Fang, X. Zhang, and E.B. Graham, et al. 2021. "Integrating Field Observations and Process-based Modeling to Predict Watershed Water Quality under Environmental Perturbations." Journal of Hydrology 602. PNNL-SA-148272. doi:10.1016/j.jhydrol.2020.125762
- Fang Y., L. Leung, B. Wolfe, M. Detto, R. Knox, N.G. McDowell, and C. Grossiord, et al. 2021. "Disentangling the effects of vapor pressure deficit and soil water availability on canopy conductance in a seasonal tropical forest during the 2015 EI Niiio drought." Journal of Geophysical Research: Atmospheres 126, no. 10:e2021JD035004. PNNL-SA-146993. doi:10.1029/2021JD035004
- Fang Y., L. Leung, B. Wolfe, M. Detto, R. Knox, N.G. McDowell, and C. Grossiord, et al. 2021. "Disentangling the Effects of Vapor Pressure Defificit and Soil Water Availability on Canopy Conductance in a Seasonal Tropical Forest During the 2015 El Niņo Drought." Journal of Geophysical Research: Atmospheres 126, no. 10:Art. No. e2021JD035004. PNNL-SA-167272. doi:10.1029/2021JD035004
- Hou Z., H. Ren, C.J. Murray, X. Song, Y. Fang, E.V. Arntzen, and X. Chen, et al. 2021. "A Novel Construct for Scaling Groundwater-River Interactions Based on Machine-Guided Hydromorphic Classification." Environmental Research Letters 16, no. 10:104016. PNNL-SA-151112. doi:10.1088/1748-9326/ac24ce
- Ren H., X. Song, Y. Fang, Z. Hou, and T.D. Scheibe. 2021. "Machine Learning Analysis of Hydrologic Exchange Flows and Transit Time Distributions in a Large Regulated River." Frontiers in Artificial Intelligence 4. PNNL-SA-158855. doi:10.3389/frai.2021.648071
- Song X., Y. Fang, J. Bao, H. Ren, Z. Duan, W.A. Perkins, and H. Zhou, et al. 2021. "Scale-dependent spatial variabilities of hydrological exchange flows and transit time in a large regulated river." Journal of Hydrology 598. PNNL-SA-152146. doi:10.1016/j.jhydrol.2021.126283
2020
- Chen X., J.M. Zachara, V.R. Vermeul, G. Hammond, M.D. Freshley, and Y. Fang. 2020. "Understanding Contaminant Migration within a Dynamic River Corridor through Field Experiments and Reactive Transport Modeling." Frontiers in Water 2. PNNL-SA-151389. doi:10.3389/frwa.2020.533796
- Fang Y., X. Chen, J.D. Gomez Velez, X. Zhang, Z. Duan, G. Hammond, and A.E. Goldman, et al. 2020. "A multirate mass transfer model to represent the interaction of multicomponent biogeochemical processes between surface water and hyporheic zones (SWAT-MRMT-R 1.0)." Geoscientific Model Development 13, no. 8:3553-3569. PNNL-SA-148784. doi:10.5194/gmd-13-3553-2020
- Fang Y., X. Song, H. Ren, W.A. Perkins, P. Shuai, M.C. Richmond, and Z. Hou, et al. 2020. "High-performance simulation of dynamic hydrologic exchange and implications for surrogate flow and reactive transport modeling in a large river corridor." Frontiers in Water 2. PNNL-SA-153319. doi:10.3389/frwa.2020.564211
- Yabusaki S.B., A.N. Myers-Pigg, N.D. Ward, S.R. Waichler, A. Sengupta, Z. Hou, and X. Chen, et al. 2020. "Floodplain inundation and salinization from a recently restored first-order tidal stream." Water Resources Research 56, no. 7:Article No. e2019WR026850. PNNL-SA-149723. doi:10.1029/2019WR026850
- Yang C., H. Li, Y. Fang, C. Cui, T. Wang, C. Zheng, and L. Leung, et al. 2020. "Effects of groundwater pumping on ground surface temperature: A regional modeling study in the North China Plain." Journal of Geophysical Research: Atmospheres 125, no. 9:Article No. e2019JD031764. PNNL-SA-152773. doi:10.1029/2019JD031764
2019
- Fang Y., S.B. Yabusaki, A. Ahkami, X. Chen, and T.D. Scheibe. 2019. "An efficient three-dimensional rhizosphere modeling capability to study the effect of root system architecture on soil water and reactive transport." Plant and Soil 441, no. 1-2:33-48. PNNL-SA-138450. doi:10.1007/s11104-019-04068-z
2017
- Fang Y., L. Leung, Z. Duan, M.S. Wigmosta, R.M. Maxwell, J.Q. Chambers, and J. Tomasella. 2017. "Influence of landscape heterogeneity on water availability to tropical forests in an Amazonian catchment and implications for modeling drought response." Journal of Geophysical Research: Atmospheres 122, no. 16:8410-8426. PNNL-SA-125270. doi:10.1002/2017JD027066
- Yabusaki S.B., M.J. Wilkins, Y. Fang, K.H. Williams, B. Arora, J.R. Bargar, and J.R. Bargar, et al. 2017. "Water Table Dynamics and Biogeochemical Cycling in a Shallow, Variably-Saturated Floodplain." Journal of Environmental Science and Technology 51, no. 6:3307-3317. PNNL-SA-121243. doi:10.1021/acs.est.6b04873
2016
- Danczak R.E., S.B. Yabusaki, K.H. Williams, Y. Fang, C. Hobson, and M.J. Wilkins. 2016. "Snowmelt Induced Hydrologic Perturbations Drive Dynamic Microbiological and Geochemical Behaviors across a Shallow Riparian Aquifer." Frontiers in Earth Science 4. PNNL-SA-120170. doi:10.3389/feart.2016.00057
2015
- Bao J., Z. Hou, Y. Fang, H. Ren, and G. Lin. 2015. "Uncertainty quantification for evaluating the impacts of fracture zone on pressure build-up and ground surface uplift during geological CO2 sequestration." Greenhouse Gases: Science and Technology 5, no. 3:254-267. PNNL-SA-101583. doi:10.1002/ghg.1456
- Bao J., Z. Xu, and Y. Fang. 2015. "A coupled discrete element and finite element model for multiscale simulation of geological carbon sequestration." Greenhouse Gases: Science and Technology 5, no. 4:474-486. PNNL-SA-96622. doi:10.1002/ghg.1491
- Bao J., Z. Xu, and Y. Fang. 2015. "Uncertainty Quantification for the Reliability of the Analytical Analysis for the Simplified Model of CO2 Geological Sequestration." Greenhouse Gases: Science and Technology 5, no. 1002:141-151. PNNL-SA-100416. doi:10.1002/ghg.1436
- Bonneville A., E. Heggy, C.E. Strickland, J. Normand, J.A. Dermond, Y. Fang, and E.C. Sullivan. 2015. "Geophysical Monitoring of Ground Surface Deformation Associated with a Confined Aquifer Storage and Recovery Operation." Water Resources Management 29, no. 13:4667-4682. PNNL-SA-93318. doi:10.1007/s11269-015-1083-y
- Fang Y., C. Liu, and L. Leung. 2015. "Accelerating the spin-up of the coupled carbon and nitrogen cycle model in CLM4." Geoscientific Model Development 8, no. 3:781-789. PNNL-SA-106100. doi:10.5194/gmd-8-781-2015
- Long P.E., K.H. Williams, J.A. Davis, P.M. Fox, M.J. Wilkins, S.B. Yabusaki, and Y. Fang, et al. 2015. "Bicarbonate Impact on U(VI) Bioreduction in a Shallow Alluvial Aquifer." Geochimica et Cosmochimica Acta 150. PNNL-SA-106900. doi:10.1016/j.gca.2014.11.013
- Yabusaki S.B., S. Sengor, and Y. Fang. 2015. "A Uranium Bioremediation Reactive Transport Benchmark." Computational Geosciences 19, no. 3:551-567. PNNL-SA-108820. doi:10.1007/s10596-015-9474-y
- Yang X., C. Liu, Y. Fang, R. Hinkle, H. Li, V.L. Bailey, and B. Bond-Lamberty. 2015. "Simulations of Ecosystem Hydrological Processes Using a Unified Multi-Scale Model." Ecological Modelling 296. PNNL-SA-102861. doi:10.1016/j.ecolmodel.2014.10.032
2014
- Bao J., Y. Chu, Z. Xu, A.M. Tartakovsky, and Y. Fang. 2014. "Uncertainty quantification for the impact of injection rate fluctuation on the geomechanical response of geological carbon sequestration." International Journal of Greenhouse Gas Control 20. PNNL-SA-93937. doi:10.1016/j.ijggc.2013.10.023
- Bao J., Z. Xu, and Y. Fang. 2014. "A Finite-Element Model for Simulation of Carbon Dioxide Sequestration." Environmental Geotechnics 1, no. 3:152-160. PNNL-SA-88505. doi:10.1680/envgeo.13.00024
- Fang Y., C. Liu, M. Huang, H. Li, and L. Leung. 2014. "Steady state estimation of soil organic carbon using satellite-derived canopy leaf area index." Journal of Advances in Modeling Earth Systems 6, no. 4:1049-1064. PNNL-SA-101823. doi:10.1002/2014MS000331
- Fang Z., Z. Hou, G. Lin, D.W. Engel, Y. Fang, and P.W. Eslinger. 2014. "Exploring the effects of data quality, data worth, and redundancy of CO2 gas pressure and saturation data on reservoir characterization through PEST Inversion." Environmental Earth Sciences 71, no. 7:3025-3037. PNNL-SA-88296. doi:10.1007/s12665-013-2680-9
- Hou Z., D.H. Bacon, D.W. Engel, G. Lin, Y. Fang, H. Ren, and Z. Fang. 2014. "Uncertainty analyses of CO2 plume expansion subsequent to wellbore CO2 leakage into aquifers." International Journal of Greenhouse Gas Control 27. PNNL-SA-94280. doi:10.1016/j.ijggc.2014.05.004
- Yang X., C. Liu, J. Shang, Y. Fang, and V.L. Bailey. 2014. "A Unified Multi-Scale Model for Pore-Scale Flow Simulations in Soils." Soil Science Society of America Journal 78, no. 1:108-118. PNNL-SA-95780. doi:10.2136/sssaj2013.05.0190
2013
- Bao J., Z. Hou, Y. Fang, H. Ren, and G. Lin. 2013. "Uncertainty quantification for evaluating impacts of caprock and reservoir properties on pressure buildup and ground surface displacement during geological CO2 sequestration." Greenhouse Gases: Science and Technology 3, no. 5:338-358. PNNL-SA-94881.
- Bao J., Z. Hou, Y. Fang, H. Ren, and G. Lin. 2013. "Uncertainty quantification for evaluating impacts of caprock and reservoir properties on pressure buildup and ground surface displacement during geological CO2 sequestration." Greenhouse Gases: Science and Technology 3, no. 5:338-358. PNNL-SA-95799. doi:10.1002/ghg.1362
- Bao J., Z. Xu, and Y. Fang. 2013. "A Finite Element Model for Simulation of Carbon Dioxide Sequestration." Environmental Geotechnics 1, no. 3:152-160. PNNL-SA-97945. doi:10.1680/envgeo.13.00024
- Bao J., Z. Xu, G. Lin, and Y. Fang. 2013. "Evaluating the impact of aquifer layer properties on geomechanical response during CO2 geological sequestration." Computers & Geosciences 54. PNNL-SA-92354. doi:10.1016/j.cageo.2013.01.015
- Fang Y., B.N. Nguyen, K.C. Carroll, Z. Xu, S.B. Yabusaki, T.D. Scheibe, and A. Bonneville. 2013. "Development of a coupled thermo-hydro-mechanical model in discontinuous media for carbon sequestration." International Journal of Rock Mechanics and Mining Sciences 62. PNNL-SA-88739. doi:10.1016/j.ijrmms.2013.05.002
- Hou Z., D.W. Engel, G. Lin, Y. Fang, and Z. Fang. 2013. "An Uncertainty Quantification Framework for Studying the Effect of Spatial Heterogeneity in Reservoir Permeability on CO2 Sequestration." Mathematical Geosciences 45, no. 7:799-817. PNNL-SA-85209. doi:10.1007/s11004-013-9459-0
- Tartakovsky G.D., A.M. Tartakovsky, T.D. Scheibe, Y. Fang, R. Mahadevan, and D.R. Lovley. 2013. "Pore-scale simulation of microbial growth using a genome-scale metabolic model: Implications for Darcy-scale reactive transport." Advances in Water Resources 59. PNNL-SA-90155. doi:10.1016/j.advwatres.2013.05.007
- Yeh G.T., J. Gwo, M. Siegel, M. Li, Y. Fang, F. Zhang, and W. Luo, et al. 2013. "Innovative mathematical modeling in environmental remediation." Journal of Environmental Radioactivity 119. PNNL-SA-95622. doi:10.1016/j.jenvrad.2011.06.010
2012
- Fang Y., M.J. Wilkins, S.B. Yabusaki, M.S. Lipton, and P.E. Long. 2012. "Evaluation of a Genome-Scale In Silico Metabolic Model for Geobacter metallireducens Using Proteomic Data from a Field Biostimulation Experiment." Applied and Environmental Microbiology 78, no. 24:8735 - 8742. PNNL-SA-88037. doi:10.1128/AEM.01795-12
- Liu C., and Y. Fang. 2012. "Kinetic Modeling of Microbiological Processes." Journal of Petroleum & Environmental Biotechnology 3, no. 6:Article No. e109. PNNL-SA-90372.
- White M.D., and Y. Fang. 2012. "STOMP-ECKEChem: An Engineering Perspective on Reactive Transport in Geologic Media." In Groundwater Reactive Transport Models, edited by F Zhang, GT Yeh and JC Parker. 112--140. Oak Park, Illinois:Bentham Science Publishers. PNNL-SA-67230.
- Xu Z., Y. Fang, T.D. Scheibe, and A. Bonneville. 2012. "A fluid pressure and deformation analysis for geological sequestration of carbon dioxide." Computers & Geosciences 46. PNNL-SA-82750.
- Xu Z., Y. Fang, T.D. Scheibe, and A. Bonneville. 2012. "A Hydro-mechanical Model and Analytical Solutions for Geomechanical Modeling of Carbon Dioxide Geological Sequestration." In Energy Technology 2012: Carbon Dioxide Management and Other Technologies, edited by MD Salazar-Villalpando, et al. Hoboken, New Jersey:John Wiley & Sons, Inc. PNNL-SA-85371.
2011
- Fang Y., T.D. Scheibe, R. Mahadevan, S. Garg, P.E. Long, and D.R. Lovley. 2011. "Direct coupling of a genome-scale microbial in silico model and a groundwater reactive transport model." Journal of Contaminant Hydrology 122, no. 1-4:96-103. PNNL-SA-75520. doi:10.1016/j.jconhyd.2010.11.007
- Yabusaki S.B., Y. Fang, K.H. Williams, C.J. Murray, A.L. Ward, R. Dayvault, and S.R. Waichler, et al. 2011. "Variably Saturated Flow and Multicomponent Biogeochemical Reactive Transport Modeling of a Uranium Bioremediation Field Experiment." Journal of Contaminant Hydrology 126, no. 3-4:271-290. PNNL-SA-76394. doi:10.1016/j.jconhyd.2011.09.002
2010
- Scheibe T.D., B.J. Palmer, K.L. Schuchardt, Y. Fang, and A.M. Tartakovsky. 2010. "Simulations of Subsurface Flow and Transport at the Pore and Continuum Scales." In SciDAC 2010 Scientific Discovery Through Advanced Computing, July 11-15, 2010, Chattanooga, Tennessee. Washington Dc:US Department of Energy, Office of Science. PNNL-SA-74118.
- Yeh G.T., Y. Fang, F. Zhang, J. Sun, Y. Li, M. Li, and M. Siegel. 2010. "Numerical modeling of coupled fluid flow and thermal and reactive biogeochemical transport in porous and fractured media." Computational Geosciences 14, no. 1:149-170. PNNL-SA-66341.
- Zhao J., J. Zhao, Y. Fang, T.D. Scheibe, D.R. Lovley, and R. Mahadevan. 2010. "Modeling and sensitivity analysis of electron capacitance for Geobacter in sedimentary environments." Journal of Contaminant Hydrology 112, no. 1-4:30-44. PNNL-SA-64401. doi:10.1016/j.jconhyd.2009.10.002
2009
- Fang Y., S.B. Yabusaki, S.J. Morrison, J.E. Amonette, and P.E. Long. 2009. "Multicomponent reactive transport modeling of uranium bioremediation field experiments." Geochimica et Cosmochimica Acta 73, no. 20:6029-6051. PNNL-SA-62890.
- Gurumoorthi V., M. Krishnan, Y. Fang, B.J. Palmer, and D. Chavarría-Miranda. 2009. "Multiple Component Multiple Data Programming in Subsurface Simulations: The CCA Approach." In Proceedings of the Workshop on Component-Based High Performance Computing (CBHPC 2009). New York, New York:ACM Press. PNNL-SA-68966.
- Palmer B.J., Y. Fang, V. Gurumoorthi, G.E. Hammond, J.A. Fort, and T.D. Scheibe. 2009. "Developing a Component-Based Framework for Subsurface Simulation using the Common Component Architecture." In SciDAC 2009: Journal of Physics: Conference Series, 180, Paper No. 012064. London:IOP Publishing. PNNL-SA-66756. doi:10.1088/1742-6596/180/1/012064
- Scheibe T.D., R. Mahadevan, Y. Fang, S. Garg, P.E. Long, and D.R. Lovley. 2009. "Coupling a Genome-Scale Metabolic Model with a Reactive Transport Model to Describe In Situ Uranium Bioremediation." Microbial Biotechnology 2, no. 2:274-286. PNNL-SA-61861. doi:10.1111/j.1751-7915.2009.00087.x
2008
- Yabusaki S.B., Y. Fang, and S.R. Waichler. 2008. "Building Conceptual Models of Field-Scale Uranium Reactive Transport in a Dynamic Vadose Zone-Aquifer-River System." Water Resources Research 44. PNNL-SA-57625. doi:10.1029/2007WR006617
2007
- Palmer B.J., Y. Fang, G.E. Hammond, and V. Gurumoorthi. 2007. "Component-Based Framework for Subsurface Simulations." In SciDAC 2007. Published in Journal of Physics: Conference Series, 78, 012056 (5 pages). Bristol:IOP Publishing. PNNL-SA-56016. doi:10.1088/1742-6596/78/1/012056
- Yabusaki S.B., Y. Fang, P.E. Long, C.T. Resch, A.D. Peacock, J. Komlos, and P.R. Jaffe, et al. 2007. "Uranium Removal from Groundwater via In Situ Biostimulation: Field-Scale Modeling of Transport and Biological Processes." Journal of Contaminant Hydrology 93, no. 2007:216-235. PNNL-SA-50626. doi:10.1016/j.jconhyd.2007.02.005
2006
- Fang Y., S.B. Yabusaki, and G. Yeh. 2006. "A General Simulator for Reaction-Based Biogeochemical Processes." Computers & Geosciences 32, no. 1:64-72. PNNL-SA-46059. doi:10.1016/j.cageo.2005.05.003
- Fang Y., T.D. Scheibe, E.E. Roden, W. Kamolpornwijit, and S.C. Brooks. 2006. "3D Field-Scale Reactive Transport Modeling of In Situ Immobilization of Uranium in Structured Porous Media via Biostimulation." In Proceedings of teh XVI International Conference on Computational Methods in Water Resources (CMWR XVI), June 18-22, 2006, Copenhagen, Denmark, edited by PJ Binning, et al. Kongens Lyngby:Technical University of Denmark. PNNL-SA-49173.
- Saripalli P., Y. Fang, N. Gupta, N. Gupta, and J.R. Sminchak. 2006. "AN INTEGRATED NUMERICAL TRANSPORT MODELING APPROACH FOR RISK ASSESSMENT OF GEOLOGICAL SEQUESTRATION PROJECTS." In 8th International Conference on Greenhouse Gas Technologies (GHGT-8), June 1-22, 2006, Trondheim, Norway, 2, 962-967. Oxford:Elsevier Science. PNWD-SA-7403.
- Scheibe T.D., Y. Fang, C.J. Murray, E.E. Roden, J. Chen, Y. Chien, and S.C. Brooks, et al. 2006. "Transport and biogeochemical reaction of metals in a physically and chemically heterogeneous aquifer." Geosphere 2, no. 4:220-235. PNNL-SA-47423.
- Tartakovsky A.M., T.D. Scheibe, G. Redden, P. Meakin, and Y. Fang. 2006. "Smoothed Particle Hydrodynamics Model for Reactive Transport and Mineral Precipitation." In CMWR XVI - International Conference on Computational Methods in Water Resources. Copenhagen, Denmark, June 18-22, 2006, 8 pages. Copenhagen:Technical University of Denmark (DTU). PNNL-SA-51850. Smoothed Particle Hydrodynamics Model for Reactive Transport and Mineral Precipitation
2004
- Fang Y., S.B. Yabusaki, and G.T. Yeh. 2004. "A generic reaction-based biogeochemical simulator." In Proceedings of the 15th International Conference on Computational Methods in Water Resources (CMWR XV), June 13-17, 2004 Chapel Hill, NC, USA. Computational Methods in Water Resources, edited by C.T. Miller, M.W. Farthing, W.G. Gray, and G.F. Pinder, 1, 869-878. Amsterdam:Elsevier. PNNL-SA-40458.